Registry of Open Data on AWS

Usage examples for all datasets listed in the Registry of Open Data on AWS tagged with us.

Synthea synthetic patient generator data in OMOP Common Data Model

Tutorials

Create data science environments on AWS for health analysis using OHDSI by James Wiggins
AWS CloudFormationAmazon EC2Amazon RDS
Map clinical notes to the OMOP Common Data Model and healthcare ontologies using Amazon Comprehend Medical by James Wiggins
Amazon ComprehendAWS CloudFormationAmazon EC2Amazon RDS
Predict patient health outcomes using OHDSI and machine learning on AWS by James Wiggins
AWS CloudFormationAmazon EC2Amazon RDS

Tools & Applications

OHDSIonAWS by James Wiggins

GHRSST Level 4 MUR Global Foundation Sea Surface Temperature Analysis (v4.1)

Tutorials

MUR Sea Surface Temperature Analysis of Washington State by Zoë Walschots
Using Sea Surface Temperature and Sea Surface Height Data for Hurricane Helene by Julie Sanchez

Publications

A multi-scale high-resolution analysis of global sea surface temperature by Chin, T.M, J. Vazquez-Cuervo, and E.M. Armstrong

MIMIC-III (‘Medical Information Mart for Intensive Care’)

Tutorials

Building predictive disease models using Amazon SageMaker with Amazon HealthLake normalized data by Ujjwal Ratan, Nihir Chadderwala, and Parminder Bhatia
AWS GlueAWS HealthLakeAmazon SageMaker
Perform biomedical informatics without a database using MIMIC-III data and Amazon Athena by James Wiggins, Alistair Johnson
Amazon AthenaAWS Glue

Tools & Applications

MIMIC-code GitHub repository by Alistair Johnson

Multiview Extended Video with Activities (MEVA)

Publications

ActEV: Activities in Extended Video by National Institute of Standards and Technology (NIST)
MEVA: A Large-Scale Multiview, Multimodal Video Dataset for Activity Detection by Kellie Corona, Katie Osterdahl, Roderic Collins, Anthony Hoogs
TinyAction Challenge: Recognizing Real-world Low-resolution Activities in Videos by Praveen Tirupattur, Aayush J Rana, Tushar Sangam, Shruti Vyas, Yogesh S Rawat, Mubarak Shah

CMS 2008-2010 Data Entrepreneurs’ Synthetic Public Use File (DE-SynPUF) in OMOP Common Data Model

Tutorials

Create data science environments on AWS for health analysis using OHDSI by James Wiggins
AWS CloudFormationAmazon EC2Amazon RDS
Map clinical notes to the OMOP Common Data Model and healthcare ontologies using Amazon Comprehend Medical by James Wiggins
Amazon ComprehendAWS CloudFormationAmazon EC2Amazon RDS
Predict patient health outcomes using OHDSI and machine learning on AWS by James Wiggins
AWS CloudFormationAmazon EC2Amazon RDS

Tools & Applications

OHDSIonAWS by James Wiggins

If you want to add a dataset or usage example to this registry, please follow the instructions on the Registry of Open Data on AWS GitHub repository or tell us about your project.