Registry of Open Data on AWS

Usage examples for all datasets listed in the Registry of Open Data on AWS tagged with x-ray tomography.

BossDB Open Neuroimagery Datasets

Tutorials

Data access and download by Jordan Matelsky

Tools & Applications

bossDB by bossDB Team
CloudVolume by Seung Lab

Publications

A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data by J. T. Vogelstein, E. Perlman, B. Falk, A. Baden, W. Gray Roncal, V. Chandrashekhar, F. Collman, S. Seshamani, J. L. Patsolic, K. Lillaney, M. Kazhdan, R. Hider, D. Pryor, J. Matelsky, T. Gion, P. Manavalan, B. Wester, M. Chevillet, E. T. Trautman, K. Khairy, E. Bridgeford, D. M. Kleissas, D. J. Tward, A. K. Crow, B. Hsueh, M. A. Wright, M. I. Miller, S. J. Smith, R. J. Vogelstein, K. Deisseroth, and R. Burns
intern: Integrated Toolkit for Extensible and Reproducible Neuroscience by Jordan K Matelsky, Luis Rodriguez, Daniel Xenes, Timothy Gion, Robert Hider Jr., Brock Wester, William Gray-Roncal
The Block Object Storage Service (bossDB): A Cloud-Native Approach for Petascale Neuroscience Discovery by Robert Hider Jr., Dean M. Kleissas, Derek Pryor, Timothy Gion, Luis Rodriguez, Jordan Matelsky, William Gray-Roncal, Brock Wester

NIFS Large Helical Device (LHD) Experiment

Tutorials

Data handling in the LHD experiments -- Guide for the collaborator (pdf) by Satoshi Ohdachi

Tools & Applications

How to retrieve diagnostic raw data and/or primarily processed data using "Retrieve" by NIFS LABCOM

Publications

Data Acquisition and Management System of LHD by Hideya Nakanishi, et al.

RSNA Abdominal Trauma Detection (RSNA-ABT)

Publications

The RSNA Abdominal Traumatic Injury CT (RATIC) Dataset by Rudie, Jeffrey D.

RSNA Cervical Spine Fracture Detection (RSNA-CSF) Dataset

Publications

The RSNA Cervical Spine Fracture CT Dataset by Ming, Hui Lin

RSNA Intracranial Hemorrhage Detection

Publications

Construction of a Machine Learning Dataset through Collaboration: The RSNA 2019 Brain CT Hemorrhage Challenge by Rudie, Jeffrey D.

RSNA Pulmonary Embolism Detection

Publications

The RSNA Pulmonary Embolism CT Dataset by Colak, Errol

If you want to add a dataset or usage example to this registry, please follow the instructions on the Registry of Open Data on AWS GitHub repository or tell us about your project.