stdpopsim species resources

genetic maps life sciences population genetics recombination maps simulations

Description

Contains all resources (genome specifications, recombination maps, etc.) required for species specific simulation with the stdpopsim package. These resources are originally from a variety of other consortium and published work but are consolidated here for ease of access and use. If you are interested in adding a new species to the stdpopsim resource please raise an issue on the stdpopsim GitHub page to have the necessary files added here.

Update Frequency

Data will be added as new species, genome assemblies, and genetic map data for already included species become available.

License

Please see the individual datasets compiled here for licensing details and make sure to cite the original sources of any elements of this data that you use.

Documentation

https://stdpopsim.readthedocs.io/en/latest/catalog.html

Managed By

Andrew Kern & Jerome Kelleher

See all datasets managed by Andrew Kern & Jerome Kelleher.

Contact

https://github.com/popsim-consortium/stdpopsim/issues

Resources on AWS


Edit this dataset entry on GitHub

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