bam bioinformatics biology coronavirus COVID-19 fast5 fasta fastq genetic genomic health json life sciences long read sequencing medicine MERS metadata open source software RDF SARS SARS-CoV-2 SPARQL
COVID-19 PubSeq is a free and open online bioinformatics public sequence resource with on-the-fly analysis of sequenced SARS-CoV-2 samples that allows for a quick turnaround in identification of new virus strains. PubSeq allows anyone to upload sequence material in the form of FASTA or FASTQ files with accompanying metadata through the web interface or REST API.
Creative Commons Attribution 4.0 International (CC BY 4.0) unless otherwise specified.
See all datasets managed by UTHSC GeneNetwork.
PubSeq - Public Sequence Resource was accessed on
DATE from https://registry.opendata.aws/pubseq.
aws s3 ls --no-sign-request s3://pubseq-datasets/
aws s3 ls --no-sign-request s3://pubseq-output-data/
Edit this dataset entry on GitHub