Open Targets

biotech blueprint chemistry genetic genomic life sciences molecule parquet

Description

This a Parquet representation of the Open Targets Platform's 2020-06 export. The Open Targets Platform integrates evidence from genetics, genomics, transcriptomics, drugs, animal models and scientific literature to score and rank target-disease associations for drug target identification. The Open Targets Platform (https://www.targetvalidation.org) is a freely available resource for the integration of genetics, genomics, and chemical data to aid systematic drug target identification and prioritisation.

Update Frequency

Under 2 months after a new Open Targets release.

License

https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_attributions.txt

Documentation

https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_install.md

Managed By

See all datasets managed by Amazon Web Services.

Contact

https://github.com/aws-samples/data-lake-as-code/issues

Usage Examples

Tutorials
Publications

Resources on AWS

  • Description
    Open Targets 20.06. Information on Open Targets releases can be found here.
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::aws-roda-hcls-datalake/opentargets_20_06/
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls s3://aws-roda-hcls-datalake/opentargets_20_06/ --no-sign-request
  • Description
    Open Targets 19.11
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::aws-roda-hcls-datalake/opentargets_1911/
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls s3://aws-roda-hcls-datalake/opentargets_1911/ --no-sign-request

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