The Registry of Open Data on AWS is now available on AWS Data Exchange
All datasets on the Registry of Open Data are now discoverable on AWS Data Exchange alongside 3,000+ existing data products from category-leading data providers across industries. Explore the catalog to find open, free, and commercial data sets. Learn more about AWS Data Exchange

Integrative Analysis of Lung Adenocarcinoma in Environment and Genetics Lung cancer Etiology (Phase 2)

cancer epigenomics genomic life sciences STRIDES whole exome sequencing whole genome sequencing

Description

We performed whole genome sequencing and whole exome sequencing of 31 lung adenocarcinoma (LUAD) samples from the Environment And Genetics in Lung cancer Etiology (EAGLE) study. The EAGLE study is made available on AWS via the NIH STRIDES Initiative (https://aws.amazon.com/blogs/publicsector/aws-and-national-institutes-of-health-collaborate-to-accelerate-discoveries-with-strides-initiative/).

Update Frequency

Genomic Data Commons (GDC) is source of truth for this dataset; GDC offers monthly data releases, although this dataset may not be updated at every release.

License

(NIH Genomic Data Sharing Policy)[https://gdc.cancer.gov/access-data/data-access-policies]

Documentation

https://ftp.ncbi.nlm.nih.gov/dbgap/studies/phs001239/phs001239.v1.p1

Managed By

See all datasets managed by Center for Translational Data Science at The University of Chicago.

Contact

support@nci-gdc.datacommons.io

How to Cite

Integrative Analysis of Lung Adenocarcinoma in Environment and Genetics Lung cancer Etiology (Phase 2) was accessed on DATE from https://registry.opendata.aws/luad-eagle.

Usage Examples

Tools & Applications

Resources on AWS

  • Description
    Whole Genome Sequencing, Whole Exome Sequencing
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::gdc-cddp-eagle-1-phs001239-2-open
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://gdc-cddp-eagle-1-phs001239-2-open/

Edit this dataset entry on GitHub

Tell us about your project

Home