BrainWideBench - IBL Benchmark for Neural Foundation Models in Neuroscience

benchmark life sciences machine learning Mus musculus neurophysiology neuroscience open source software

Description

BrainWideBench is a large-scale, multi-task benchmark for evaluating neural foundation models, derived from the International Brain Laboratory (IBL) Brainwide Map dataset. It contains preprocessed Neuropixels recordings from 139 mice spanning 276 brain regions during a standardized visual decision-making task. The benchmark is organized around three complementary task suites: behavioral decoding (TS1), neural activity prediction (TS2), and brain region identification (TS3). Data are processed into a standardized format using the torch_brain library and include spike-sorted neural recordings, behavioral signals (wheel movements, paw kinematics, whisker motion energy, lick detection), trial structure, stimulus parameters, and anatomical annotations. A strict animal-level train/evaluation split separates 126 pretraining animals (423 sessions) from 13 held-out evaluation animals (29 sessions), enabling reproducible evaluation of across-animal generalization.

Update Frequency

As needed with benchmark releases

License

CC-BY 4.0

Documentation

https://brainbench-org.github.io/ibl-bwb/

Managed By

International Brain Laboratory

See all datasets managed by International Brain Laboratory.

Contact

info@internationalbrainlab.org

How to Cite

BrainWideBench - IBL Benchmark for Neural Foundation Models in Neuroscience was accessed on DATE from https://registry.opendata.aws/ibl-brain-wide-bench.

Usage Examples

Tools & Applications
Publications

Resources on AWS

  • Description
    Preprocessed benchmark data in HDF5 format, including spike-sorted neural recordings, behavioral signals, anatomical region labels, and quality-control metadata for all sessions. Organized by animal and session.
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::brain-wide-bench
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://brain-wide-bench/
    Explore
    Browse Bucket
  • Description
    Notifications for new brain-wide-bench data
    Resource type
    SNS Topic
    Amazon Resource Name (ARN)
    arn:aws:sns:us-east-1:842577843587:brain-wide-bench-sns
    AWS Region
    us-east-1

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