The Registry of Open Data on AWS is now available on AWS Data Exchange
All datasets on the Registry of Open Data are now discoverable on AWS Data Exchange alongside 3,000+ existing data products from category-leading data providers across industries. Explore the catalog to find open, free, and commercial data sets. Learn more about AWS Data Exchange

Human Cell Atlas

biology cell biology cell imaging gene expression genome genomic Homo sapiens life sciences Mus musculus single-cell transcriptomics transcriptomics

Description

The Human Cell Atlas (HCA) is a collaborative community of international scientists. Our mission is to create comprehensive reference maps of all the cells in the human body as a basis for both understanding human health and diagnosing, monitoring, and treating disease. The HCA registry has more than one thousand member scientists from hundreds of institutions around the world. The project is steered and governed by an Organizing Committee, co-chaired by Aviv Regev and Sarah Teichmann.

Update Frequency

Monthly

License

https://data.humancellatlas.org/about/data-use-agreement

Documentation

https://data.humancellatlas.org/

Managed By

UC Santa Cruz Genomics Institute, University of California, Santa Cruz (UCSC)

See all datasets managed by UC Santa Cruz Genomics Institute, University of California, Santa Cruz (UCSC).

Contact

https://data.humancellatlas.org/contact

How to Cite

Human Cell Atlas was accessed on DATE from https://registry.opendata.aws/humancellatlas. The URL for the HCA Data Portal, https://data.humancellatlas.org, can be used as the citation for data obtained from the HCA. Alternatively, you can cite: Regev A., et al. 2017. The Human Cell Atlas. Elife. Dec 5;6. pii: e27041. doi: 10.7554/eLife.27041.

Usage Examples

Publications
  • The Human Cell Atlas from a cell census to a unified foundation model by Jennifer E. Rood, Samantha Wynne, Lucia Robson, Anna Hupalowska, John Randell, Sarah A. Teichmann & Aviv Regev
  • The Human Cell Atlas White Paper by Aviv Regev, Sarah Teichmann, Orit Rozenblatt-Rosen, Michael Stubbington, Kristin Ardlie, Ido Amit, Paola Arlotta, Gary Bader, Christophe Benoist, Moshe Biton, Bernd Bodenmiller, Benoit Bruneau, Peter Campbell, Mary Carmichael, Piero Carninci, Leslie Castelo-Soccio, Menna Clatworthy, Hans Clevers, Christian Conrad, Roland Eils, Jeremy Freeman, Lars Fugger, Berthold Goettgens, Daniel Graham, Anna Greka, Nir Hacohen, Muzlifah Haniffa, Ingo Helbig, Robert Heuckeroth, Sekar Kathiresan, Seung Kim, Allon Klein, Bartha Knoppers, Arnold Kriegstein, Eric Lander, Jane Lee, Ed Lein, Sten Linnarsson, Evan Macosko, Sonya MacParland, Robert Majovski, Partha Majumder, John Marioni, Ian McGilvray, Miriam Merad, Musa Mhlanga, Shalin Naik, Martijn Nawijn, Garry Nolan, Benedict Paten, Dana Pe'er, Anthony Philippakis, Chris Ponting, Steve Quake, Jayaraj Rajagopal, Nikolaus Rajewsky, Wolf Reik, Jennifer Rood, Kourosh Saeb-Parsy, Herbert Schiller, Steve Scott, Alex Shalek, Ehud Shapiro, Jay Shin, Kenneth Skeldon, Michael Stratton, Jenna Streicher, Henk Stunnenberg, Kai Tan, Deanne Taylor, Adrian Thorogood, Ludovic Vallier, Alexander van Oudenaarden, Fiona Watt, Wilko Weicher, Jonathan Weissman, Andrew Wells, Barbara Wold, Ramnik Xavier, Xiaowei Zhuang, Human Cell Atlas Organizing Committee
  • The Human Cell Atlas: towards a first draft atlas by Various authors
  • The Human Cell Atlas: towards a first draft atlas by Various authors
  • The network effect: studying COVID-19 pathology with the Human Cell Atlas by Sarah Teichmann, Aviv Regev

Resources on AWS


Edit this dataset entry on GitHub

Tell us about your project

Home