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Guy's Breast Cancer Lymph Nodes (GRAPE)

biology breast cancer cancer computational pathology histopathology life sciences

Description

This is a retrospective dataset of 1523 H&E-stained whole slide images (WSI) of lymph nodes from breast cancer patients. The cohort consisted of 177 patients (122 LN-positive - metastasis was reported in at least 1 LN - and 55 LN-negative patients) with invasive breast carcinoma treated between 1984 and 2002 at Guy’s Hospital London, UK. Slides were scanned and digitised at 40x magnification (0.23 µm/pixel), NanoZoomer H.T2.0 2.0-HT (Hamamatsu Photonics UK, Ltd, Welwyn Garden City, UK). WSIs are in .ndpi format.

Update Frequency

New data will be added as soon as it's available

License

This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.

Documentation

https://github.com/cancerbioinformatics/GRAPE

Managed By

http://www.cancerbioinformatics.co.uk

See all datasets managed by http://www.cancerbioinformatics.co.uk.

Contact

https://github.com/cancerbioinformatics/GRAPE/issues

How to Cite

Guy's Breast Cancer Lymph Nodes (GRAPE) was accessed on DATE from https://registry.opendata.aws/guys-breast-cancer-lymph-nodes.

Resources on AWS

  • Description
    H&E-stained WSI lymph node .ndpi images in a public bucket
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::GRAPE
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://GRAPE/

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