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GATK Test Data

bioinformatics biology cancer genetic genomic life sciences

Description

The GATK test data resource bundle is a collection of files for resequencing human genomic data with the Broad Institute's Genome Analysis Toolkit (GATK).

Update Frequency

Every 3 months

License

CC0 1.0 Universal (CC0 1.0) Public Domain Dedication

Documentation

https://s3.amazonaws.com/gatk-test-data/gatk-test-data-readme.html

Managed By

Broad Institute

See all datasets managed by Broad Institute.

Contact

https://gatkforums.broadinstitute.org/gatk

How to Cite

GATK Test Data was accessed on DATE from https://registry.opendata.aws/gatk-test-data.

Usage Examples

Tools & Applications

Resources on AWS

  • Description
    The contents of this dataset is multi-modal and includes various types of genomic data, such as CRAMs/BAMs, whole-genome sequencing (WGS) data, exome data, RNA data, etc.
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::gatk-test-data
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://gatk-test-data/

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