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U.S. Environmental Protection Agency (EPA) Center for Computational Toxicology and Exposure High Throughput Transcriptomics Data

bioinformatics fastq gene expression transcriptomics

Description

High-throughput transcriptomics (HTTr) data generated by US EPA Office of Research and Development, Center for Computational Toxicology and Exposure (CCTE), Biomolecular and Computational Toxicology Division. All data is generated using TempO-Seq targeted RNA-seq technology from in vitro cell culture systems.

Update Frequency

Quarterly

License

These datasets are products of the U.S. Government and are intended for public access and use. Unless otherwise specified, all data produced by the U.S EPA is, by default, in the public domain and are not subject to domestic copyright protection under 17 U.S.C. 105. More details on the U.S. Public Domain license are available here: http://www.usa.gov/publicdomain/label/1.0/

Documentation

https://www.epa.gov/chemical-research/high-throughput-profiling-using-transcriptomics-and-high-content-imaging

Managed By

U.S. Environmental Protection Agency (https://www.epa.gov)

See all datasets managed by U.S. Environmental Protection Agency (https://www.epa.gov).

Contact

everett.logan@epa.gov

How to Cite

U.S. Environmental Protection Agency (EPA) Center for Computational Toxicology and Exposure High Throughput Transcriptomics Data was accessed on DATE from https://registry.opendata.aws/epa-ccte-httr. U.S. EPA, 2024, "U.S. EPA CCTE High-throughput transcriptomics (HTTr) data 2021-2024"

Usage Examples

Tools & Applications
Publications

Resources on AWS

  • Description
    HTTr TempO-Seq data
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::epa-ccte-httr
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://epa-ccte-httr/
    Explore
    Browse Bucket
  • Description
    Notifications for HTTR bucket
    Resource type
    SNS Topic
    Amazon Resource Name (ARN)
    arn:aws:sns:us-east-1:127085394039:epa-ccte-httr-object_created
    AWS Region
    us-east-1

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