Cryo-EM SPA Workflow Records

Description

The “Cryo-EM SPA Workflow Records” contains all outputs of all processing steps involved in cryogenic electron microscopy (cryo-EM) single particle analysis (SPA), including both intermediate and final output data. The primary focus will be on data generated by RELION and CryoSPARC, two widely used software packages for :Cryo-EM SPA. These records will be archived systematically. To ensure the data remains reproducible while minimizing storage demands, large-sized files that can be regenerated will be excluded prior to registration. The aim is to retain only the essential metadata, processing parameters, and representative outputs that allow for full reconstruction of the analysis pipeline. This approach balances the need for long-term data preservation with practical considerations for storage capacity. Through this effort, we seek to enhance transparency and reproducibility in cryo-EM research by providing a structured and accessible record of the analysis process. Importantly, the use of this dataset is intended to facilitate the development of future AI algorithms in the field of Cryo-EM.

Update Frequency

New releases are published on a rolling basis. Please contact the team via email for any questions.

License

CC0

Documentation

https://github.com/KEK-SBRC-CryoEM/cryoem-spa-workflow-records

Managed By

High Energy Accelerator Research Organization (KEK) Structural Biology Research Center (SBRC)

See all datasets managed by High Energy Accelerator Research Organization (KEK) Structural Biology Research Center (SBRC).

Contact

toshio.moriya@kek.jp

How to Cite

Cryo-EM SPA Workflow Records was accessed on DATE from https://registry.opendata.aws/cryoem-spa-workflow-records.

Usage Examples

Tutorials

• Building AI Training Datasets Using Intermediate Data on AWS by Toshio Moriya
  

Publications

• GoToCloud optimization of cloud computing environment for accelerating cryo-EM structure-based drug design by :Toshio Moriya, et al.