ChEMBL

biotech blueprint chemistry genomic life sciences molecule parquet

Description

ChEMBL is a manually curated database of bioactive molecules with drug-like properties. It brings together chemical, bioactivity and genomic data to aid the translation of genomic information into effective new drugs. This representation of ChEMBL is stored in Parquet format and most easily utilized through Amazon Athena. Follow the documentation for install instructions (< 2 minute install). New ChEMBL releases occur sporadically; the most up to date information on ChEMBL releases can be found here.

Update Frequency

Under 2 months after a new ChEMBL release.

License

https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_attributions.txt

Documentation

https://github.com/aws-samples/data-lake-as-code/blob/roda/docs/roda_install.md

Managed By

See all datasets managed by Amazon Web Services.

Contact

https://github.com/aws-samples/data-lake-as-code/issues

Usage Examples

Tutorials
Publications

Resources on AWS

  • Description
    ChEMBL 27
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::aws-roda-hcls-datalake/chembl_27/
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls s3://aws-roda-hcls-datalake/chembl_27/ --no-sign-request
  • Description
    ChEMBL 25
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::aws-roda-hcls-datalake/chembl_25/
    AWS Region
    us-east-1
    AWS CLI Access (No AWS account required)
    aws s3 ls s3://aws-roda-hcls-datalake/chembl_25/ --no-sign-request

Edit this dataset entry on GitHub

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