Description

A multi-ancestry analysis of 7,221 phenotypes using a generalized mixed model association testing framework, spanning 16,119 genome-wide association studies. We provide standard meta-analysis across all populations and with a leave-one-population-out approach for each trait. The data are provided in tsv format (per phenotype) and Hail MatrixTable (all phenotypes and variants). Metadata is provided in phenotype and variant manifests.

Update Frequency

Occasional

License

CC BY-4.0 (usage may be restricted by UK Biobank, more details on the "Downloads page")

Documentation

https://pan.ukbb.broadinstitute.org

Managed By

Analytic and Translational Genetics Unit, Massachusetts General Hospital and the Broad Institute

See all datasets managed by Analytic and Translational Genetics Unit, Massachusetts General Hospital and the Broad Institute.

Contact

ukb.diverse.gwas@gmail.com

How to Cite

UK Biobank Pan-Ancestry Summary Statistics was accessed on DATE from https://registry.opendata.aws/broad-pan-ukb.

Usage Examples

Tutorials

Hail Tutorials by Hail Team

Tools & Applications

Hail by Hail Team
Hail on AWS Quick Start by Amazon Web Services and PrivoIT

Publications

Pan-ancestry genetic analysis of the UK Biobank by Pan UKBB Team

Resources on AWS

Description

Summary statistics from Genome Wide Association Studies (GWASes) of multiple ancestries in the UK Biobank, in TSV and Hail formats

Resource type

S3 Bucket

Amazon Resource Name (ARN)

arn:aws:s3:::pan-ukb-us-east-1

AWS Region

us-east-1

AWS CLI Access (No AWS account required)

aws s3 ls --no-sign-request s3://pan-ukb-us-east-1/