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BrainGlobe Atlases

biology digital preservation Homo sapiens image processing imaging life sciences light-sheet microscopy magnetic resonance imaging medical imaging microscopy Mus musculus neurobiology neuroimaging neuroscience Rattus norvegicus volumetric imaging zarr

Description

BrainGlobe provides an archive and standardised interface to anatomical atlases from multiple species. This dataset includes these atlases, and other data (e.g. sample neuroanatomy data) to allow the greatest use of the atlases.

Update Frequency

When new atlases are packaged

License

Creative Commons CC0 1.0 Universal

Documentation

https://brainglobe.info/documentation/brainglobe-atlasapi/usage/atlas-details.html

Managed By

BrainGlobe

See all datasets managed by BrainGlobe.

Contact

hello@brainglobe.info

How to Cite

BrainGlobe Atlases was accessed on DATE from https://registry.opendata.aws/brainglobe. Claudi et al., (2020). BrainGlobe Atlas API: a common interface for neuroanatomical atlases. Journal of Open Source Software, 5(54), 2668, https://doi.org/10.21105/joss.02668

Usage Examples

Tutorials
Publications

Resources on AWS

  • Description
    Atlases and sample data in a public bucket
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    arn:aws:s3:::brainglobe
    AWS Region
    us-west-2
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://brainglobe/
  • Description
    Notifications for new BrainGlobe data
    Resource type
    SNS Topic
    Amazon Resource Name (ARN)
    arn:aws:sns:us-west-2:865567910455:brainglobe-object_created
    AWS Region
    us-west-2

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