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BossDB Open Neuroimagery Datasets

calcium imaging electron microscopy imaging life sciences light-sheet microscopy magnetic resonance imaging neuroimaging neuroscience volumetric imaging x-ray x-ray microtomography x-ray tomography


This data ecosystem, Brain Observatory Storage Service & Database (BossDB), contains several neuro-imaging datasets across multiple modalities and scales, ranging from nanoscale (electron microscopy), to microscale (cleared lightsheet microscopy and array tomography), and mesoscale (structural and functional magnetic resonance imaging). Additionally, many of the datasets include dense segmentation and meshes.

Update Frequency

New datasets are added as soon as it is available. Minor updates on existing datasets occur sporadically.


Creative Commons 4.0 International (CC BY 4.0)


Managed By

Johns Hopkins University Applied Physics Laboratory

See all datasets managed by Johns Hopkins University Applied Physics Laboratory.


How to Cite

BossDB Open Neuroimagery Datasets was accessed on DATE from

Usage Examples

Tools & Applications

Resources on AWS

  • Description
    Large 3D volumes of neuroimaging data and image processing products such as segmentation and reconstructed meshes
    Resource type
    S3 Bucket
    Amazon Resource Name (ARN)
    AWS Region
    AWS CLI Access (No AWS account required)
    aws s3 ls --no-sign-request s3://bossdb-open-data/

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